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lab:computing_resources [2018/02/21 13:16] alexskr [Computing resources] |
lab:computing_resources [2019/01/29 13:26] alexskr |
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====== Computing resources ====== | ====== Computing resources ====== | ||
- | Lab has a number of computing resources - general purpose computing node, rstudio pro server, a database server, a VM environment, | + | Lab has a number of computing resources - general purpose computing node, rstudio pro server, a database server, a VM environment, |
- | Access to most of the resources requires connecting to the VPN (https:// | + | Access to most of the resources requires connecting to the VPN ([[https:// |
Please note that none of the computing resources are HIPAA compliant so it should not be used for processing PHI or High risk data unless it is de-identified. | Please note that none of the computing resources are HIPAA compliant so it should not be used for processing PHI or High risk data unless it is de-identified. | ||
+ | |||
===== General Purpose Server ===== | ===== General Purpose Server ===== | ||
- | **khatrialb-dev1.stanford.edu | + | **khatrialb-dev1.stanford.edu ** is the server that you can use for most of your work. If you have a project requiring high CPU/Memory needs consider using cluster. |
- | + | ||
===== Database server ===== | ===== Database server ===== | ||
- | **khatrilab-db1.stanford.edu** is our database server. | + | **khatrilab-db1.stanford.edu** is our database server. |
Login Info | Login Info | ||
+ | |||
* login: Your SUNet | * login: Your SUNet | ||
- | * Password: | + | * Password: Your initial password is stored in ~/my.cnf |
===== Rstudio Pro Server ===== | ===== Rstudio Pro Server ===== | ||
- | [[https:// | + | [[https:// |
===== Cluster ===== | ===== Cluster ===== | ||
- | We have a BMIR owned cluster (10 nodes) shared with the Shah lab. Access is via khatrilab-dev1.stanford.edu. See [[lab: | + | |
- | *For complete code samples see Parallel processing for tips on how to access from khatrilab-dev1 | + | We have a BMIR owned cluster (10 nodes) shared with the Shah lab. Access is via khatrilab-dev1.stanford.edu. See [[:lab: |
- | *[[http:// | + | |
+ | * For complete code samples see Parallel processing for tips on how to access from khatrilab-dev1 | ||
+ | * [[http:// | ||